Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 28 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_02704: NADP-dependent malic enzyme
is similar to:
PaperBLAST

EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium
P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

32% id,
98% cov

EUTD_ECOLI / P77218: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; EC 2.3.1.8 from Escherichia coli
YpfA / b2458: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli
eutD / P77218: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli

32% id,
94% cov

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

29% id,
96% cov

More...

CCNA_03663: NADP-dependent malic enzyme
is similar to:
PaperBLAST

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus

31% id,
97% cov

B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis

29% id,
97% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

30% id,
89% cov

More...

CCNA_01646: dethiobiotin synthetase
is similar to:
PaperBLAST

PTA_PSEAE / Q9I5A5: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Pseudomonas aeruginosa

26% id,
22% cov

C1DQG8: phosphate acetyltransferase (EC 2.3.1.8) from Azotobacter vinelandii

28% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory