Curated BLAST
Searching in Caulobacter crescentus NA1000 (Caulo)
Found 34 curated entries in PaperBLAST's database that match '2.3.3.5' as complete word(s).
These curated entries have 19 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Caulobacter crescentus NA1000, or try another query
CCNA_03757: citrate synthase
is similar to: | PaperBLAST |
PRPC_MYCTE / H8F0D7: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; CS; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis
PRPC_MYCTU / I6Y9Q3: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis | 37% id,
92% cov |
PRPC_ABDS2 / O34002: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Antarctic bacterium | 33% id,
97% cov |
PRPC2_CORGL / Q8NSL1: 2-methylcitrate synthase 2; 2-MCS; MCS; Citrate synthase 2; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSL1: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum | 33% id,
96% cov |
P45858: citrate synthase (unknown stereospecificity) (EC 2.3.3.16); 2-methylcitrate synthase (EC 2.3.3.5) from Bacillus subtilis | 32% id,
98% cov |
PRPC1_CORGL / Q8NSH7: 2-methylcitrate synthase 1; 2-MCS; MCS; Citrate synthase 1; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSH7: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum | 32% id,
98% cov |
PRPC_SHEON / Q8EJW2: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Shewanella oneidensis
SO0344: 2-methylcitrate synthase (EC 2.3.3.5) from Shewanella oneidensis | 32% id,
95% cov |
Q9I5E3: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas aeruginosa | 32% id,
95% cov |
Q9KSC1: 2-methylcitrate synthase (EC 2.3.3.5) from Vibrio cholerae | 33% id,
94% cov |
Pf6N2E2_6062: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas fluorescens | 32% id,
95% cov |
PRPC_SALTY / Q56063: 2-methylcitrate synthase; 2-MCS; mcs; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Salmonella typhimurium
prpC / Q56063: 2-methylcitrate synthase (EC 2.3.3.5) from Salmonella typhimurium
Q56063: 2-methylcitrate synthase (EC 2.3.3.5) from Salmonella enterica | 31% id,
93% cov |
Q8X694: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli | 30% id,
93% cov |
PRPC_ECOLI / P31660: 2-methylcitrate synthase; 2-MCS; MCS; (2S,3S)-2-methylcitrate synthase; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Escherichia coli
YahS / b0333: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli
prpC / GB|AP_000985.1: 2-methylcitrate synthase; EC 2.3.3.5 from Escherichia coli
prpC / P31660: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli
P31660: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli | 30% id,
93% cov |
PRPC_CUPNE / Q937N9: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Cupriavidus necator
Q937N9: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus metallidurans | 29% id,
94% cov |
Q2Z1A8: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus necator | 29% id,
90% cov |
More... |
CCNA_01983: citrate synthase
is similar to: | PaperBLAST |
PRPC_ABDS2 / O34002: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Antarctic bacterium | 34% id,
98% cov |
Q9I5E3: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas aeruginosa | 33% id,
97% cov |
Pf6N2E2_6062: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas fluorescens | 34% id,
93% cov |
Q8X694: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli | 34% id,
91% cov |
PRPC_SHEON / Q8EJW2: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Shewanella oneidensis
SO0344: 2-methylcitrate synthase (EC 2.3.3.5) from Shewanella oneidensis | 31% id,
99% cov |
PRPC1_CORGL / Q8NSH7: 2-methylcitrate synthase 1; 2-MCS; MCS; Citrate synthase 1; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSH7: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum | 31% id,
98% cov |
PRPC2_CORGL / Q8NSL1: 2-methylcitrate synthase 2; 2-MCS; MCS; Citrate synthase 2; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSL1: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum | 31% id,
98% cov |
PRPC_ECOLI / P31660: 2-methylcitrate synthase; 2-MCS; MCS; (2S,3S)-2-methylcitrate synthase; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Escherichia coli
YahS / b0333: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli
prpC / GB|AP_000985.1: 2-methylcitrate synthase; EC 2.3.3.5 from Escherichia coli
prpC / P31660: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli
P31660: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli | 33% id,
91% cov |
PRPC_SALTY / Q56063: 2-methylcitrate synthase; 2-MCS; mcs; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Salmonella typhimurium
prpC / Q56063: 2-methylcitrate synthase (EC 2.3.3.5) from Salmonella typhimurium
Q56063: 2-methylcitrate synthase (EC 2.3.3.5) from Salmonella enterica | 33% id,
91% cov |
PRPC_CUPNE / Q937N9: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Cupriavidus necator
Q937N9: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus metallidurans | 32% id,
92% cov |
P45858: citrate synthase (unknown stereospecificity) (EC 2.3.3.16); 2-methylcitrate synthase (EC 2.3.3.5) from Bacillus subtilis | 29% id,
99% cov |
Q2Z1A8: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus necator | 33% id,
89% cov |
Q9KSC1: 2-methylcitrate synthase (EC 2.3.3.5) from Vibrio cholerae | 29% id,
95% cov |
PRPC_MYCTE / H8F0D7: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; CS; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis
PRPC_MYCTU / I6Y9Q3: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis | 31% id,
85% cov |
More... |
CCNA_03758: citrate synthase
is similar to: | PaperBLAST |
PRPC2_CORGL / Q8NSL1: 2-methylcitrate synthase 2; 2-MCS; MCS; Citrate synthase 2; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSL1: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum | 30% id,
97% cov |
PRPC1_CORGL / Q8NSH7: 2-methylcitrate synthase 1; 2-MCS; MCS; Citrate synthase 1; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSH7: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum | 35% id,
52% cov |
P45858: citrate synthase (unknown stereospecificity) (EC 2.3.3.16); 2-methylcitrate synthase (EC 2.3.3.5) from Bacillus subtilis | 35% id,
50% cov |
PRPC_ABDS2 / O34002: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Antarctic bacterium | 34% id,
51% cov |
PRPC_SHEON / Q8EJW2: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Shewanella oneidensis
SO0344: 2-methylcitrate synthase (EC 2.3.3.5) from Shewanella oneidensis | 35% id,
50% cov |
Q9I5E3: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas aeruginosa | 33% id,
50% cov |
Pf6N2E2_6062: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas fluorescens | 28% id,
58% cov |
Q9KSC1: 2-methylcitrate synthase (EC 2.3.3.5) from Vibrio cholerae | 34% id,
49% cov |
PRPC_CUPNE / Q937N9: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Cupriavidus necator
Q937N9: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus metallidurans | 34% id,
49% cov |
Q2Z1A8: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus necator | 34% id,
47% cov |
PRPC_MYCTE / H8F0D7: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; CS; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis
PRPC_MYCTU / I6Y9Q3: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis | 32% id,
47% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory