Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_02035: glycosyltransferase
is similar to:
PaperBLAST

AAK65960.1: sucrose synthase (SS1;SBSS1) (EC 2.4.1.13)

29% id,
28% cov

CAB40794.1: sucrose synthase S1 (MtSucS1;SucS1) (EC 2.4.1.13)

30% id,
26% cov

AAC17867.1: sucrose synthase (MsSUS1) (EC 2.4.1.13)

29% id,
26% cov

More...

CCNA_03455: GT1-family glycosyltransferase
is similar to:
PaperBLAST

BAC91548.1: sucrose synthase (SusA;SpsA;Gv-SuS;gvip490;gll3607) (EC 2.4.1.13)

26% id,
30% cov

CAC32462.1: sucrose synthase 3 (Sus3) (EC 2.4.1.13)
Q9AVR8: sucrose synthase (EC 2.4.1.13) from Pisum sativum

22% id,
33% cov

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

26% id,
27% cov

More...

CCNA_03277: glycosyltransferase
is similar to:
PaperBLAST

AAC28107.1: nodule-enhanced sucrose synthase (Ness) (EC 2.4.1.13)
O81610: sucrose synthase (EC 2.4.1.13) from Pisum sativum

24% id,
31% cov

CAB38022.1: sucrose synthase (Ss2) (EC 2.4.1.13)

24% id,
31% cov

SUS3_ARATH / Q9M111: Sucrose synthase 3; AtSUS3; Sucrose-UDP glucosyltransferase 3; EC 2.4.1.13 from Arabidopsis thaliana
SUS3 / Q9M111: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana
Q9M111: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana

22% id,
31% cov

More...

CCNA_00469: GT1-family glycosyltransferase
is similar to:
PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

25% id,
26% cov

SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus
ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13)
D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus

37% id,
12% cov

CCNA_02106: TonB-dependent outer membrane receptor
is similar to:
PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)

37% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1692027-1692197 (frame +3) on NC_011916
is similar to:
PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)
Also see hits to annotated proteins above

56% id,
4% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory