Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 8 curated entries in PaperBLAST's database that match '2.4.1.231' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_00469: GT1-family glycosyltransferase
is similar to:
PaperBLAST

ABC84380.1: trehalose phosphorylase (EC 2.4.1.231)

30% id,
20% cov

TREPH_GRIFR / O75003: Trehalose phosphorylase; Trehalose synthase; TSase; EC 2.4.1.231 from Grifola frondosa
BAA31350.1: trehalose synthase (EC 2.4.1.231)
TSase / O75003: trehalose phosphorylase subunit (EC 2.4.1.231) from Grifola frondosa

25% id,
23% cov

TREPH_PLESA / Q9UV63: Trehalose phosphorylase; Trehalose synthase; TSase; EC 2.4.1.231 from Pleurotus sajor-caju
AAF22230.1: trehalose phosphorylase (EC 2.4.1.231)
PsTP / Q9UV63: trehalose phosphorylase subunit (EC 2.4.1.231) from Pleurotus sajor-caju
Q9UV63: alpha,alpha-trehalose phosphorylase (configuration-retaining) (EC 2.4.1.231) from Lentinus sajor-caju

28% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

475088-476794 (frame +2) on NC_011916
is similar to:
PaperBLAST

TREPH_PLESA / Q9UV63: Trehalose phosphorylase; Trehalose synthase; TSase; EC 2.4.1.231 from Pleurotus sajor-caju
AAF22230.1: trehalose phosphorylase (EC 2.4.1.231)
PsTP / Q9UV63: trehalose phosphorylase subunit (EC 2.4.1.231) from Pleurotus sajor-caju
Q9UV63: alpha,alpha-trehalose phosphorylase (configuration-retaining) (EC 2.4.1.231) from Lentinus sajor-caju
Also see hits to annotated proteins above

25% id,
24% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory