Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 1 curated entries in PaperBLAST's database that match '2.6.1.124' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_00620: acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase
is similar to:
PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

37% id,
96% cov

CCNA_02326: acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase
is similar to:
PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

33% id,
99% cov

CCNA_03245: beta alanine-pyruvate transaminase
is similar to:
PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

25% id,
92% cov

CCNA_01648: adenosylmethionine-8-amino-7-oxononanoate
is similar to:
PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

31% id,
67% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory