Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 44 curated entries in PaperBLAST's database that match '2.6.1.19' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_03233: Acetyl ornithine aminotransferase
is similar to:
PaperBLAST

Pf6N2E2_4512: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

57% id,
97% cov

AO356_13150: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

58% id,
96% cov

AO353_08585: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

56% id,
97% cov

More...

CCNA_00620: acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase
is similar to:
PaperBLAST

slr1022 / P73133: bifunctional acetylornithine transaminase/4-aminobutyrate—2-oxoglutarate transaminase (EC 2.6.1.19; EC 2.6.1.11) from Synechocystis sp.
P73133: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

43% id,
92% cov

B1XNF8: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

43% id,
92% cov

gabT / Q0K2K2: 4-aminobutyrate aminotransferase monomer (EC 2.6.1.19) from Cupriavidus necator
Q0K2K2: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Cupriavidus necator

37% id,
92% cov

More...

CCNA_02326: acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase
is similar to:
PaperBLAST

B1XNF8: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

41% id,
97% cov

slr1022 / P73133: bifunctional acetylornithine transaminase/4-aminobutyrate—2-oxoglutarate transaminase (EC 2.6.1.19; EC 2.6.1.11) from Synechocystis sp.
P73133: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

41% id,
94% cov

PUUE_ECOLI / P50457: 4-aminobutyrate aminotransferase PuuE; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; EC 2.6.1.19 from Escherichia coli
GoaG / b1302: 4-aminobutyrate aminotransferase PuuE (EC 2.6.1.19; EC 2.6.1.48) from Escherichia coli
puuE / P50457: 4-aminobutyrate aminotransferase PuuE (EC 2.6.1.19; EC 2.6.1.48) from Escherichia coli

35% id,
93% cov

More...

CCNA_03245: beta alanine-pyruvate transaminase
is similar to:
PaperBLAST

Sama_2643: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Shewanella amazonensis

36% id,
91% cov

AO353_08585: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas fluorescens

34% id,
93% cov

PS417_27130: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) from Pseudomonas simiae

33% id,
96% cov

More...

CCNA_01648: adenosylmethionine-8-amino-7-oxononanoate
is similar to:
PaperBLAST

Sama_2636: gamma-aminobutyrate transaminase (EC 2.6.1.19) from Shewanella amazonensis

33% id,
91% cov

gabT / Q4KKA1: 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens

31% id,
93% cov

A0A0U4XQS6: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 5-aminovalerate transaminase (EC 2.6.1.48) from Corynebacterium glutamicum

31% id,
89% cov

More...

CCNA_03241: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

gabT / Q0K2K2: 4-aminobutyrate aminotransferase monomer (EC 2.6.1.19) from Cupriavidus necator
Q0K2K2: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Cupriavidus necator

29% id,
94% cov

Sama_2636: gamma-aminobutyrate transaminase (EC 2.6.1.19) from Shewanella amazonensis

28% id,
94% cov

gabT / Q4KKA1: 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens

28% id,
93% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory