Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 10 curated entries in PaperBLAST's database that match '2.7.1.56' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01001: ribokinase
is similar to:
PaperBLAST

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

25% id,
89% cov

K1PF_VIBCH / Q9KM71: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Vibrio cholerae

23% id,
88% cov

K1PF_ECOLI / P0AEW9: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Escherichia coli
Fpk / b2168: 1-phosphofructokinase (EC 2.7.1.56) from Escherichia coli
fruK / P0AEW9: 1-phosphofructokinase (EC 2.7.1.56) from Escherichia coli

28% id,
38% cov

CCNA_03849: fructokinase
is similar to:
PaperBLAST

K1PF_MYCGE / Q49396: Putative 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Mycoplasma genitalium

27% id,
37% cov

CCNA_01356: 5-dehydro-2-deoxygluconokinase IolC
is similar to:
PaperBLAST

K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii

39% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory