Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 25 curated entries in PaperBLAST's database that match '2.7.2.8' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_00285: acetylglutamate kinase
is similar to:
PaperBLAST

ARGB_THEMA / Q9X2A4: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Thermotoga maritima
Q9X2A4: acetylglutamate kinase (EC 2.7.2.8) from Thermotoga maritima

48% id,
98% cov

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa

47% id,
99% cov

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

45% id,
94% cov

More...

CCNA_00316: glutamate 5-kinase
is similar to:
PaperBLAST

ARGB_MYCTU / P9WQ01: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Mycobacterium tuberculosis

27% id,
84% cov

CCNA_01442: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae
Q01217: acetylglutamate kinase (EC 2.7.2.8) from Saccharomyces cerevisiae

30% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1553734-1554855 (frame +1) on NC_011916
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae
Q01217: acetylglutamate kinase (EC 2.7.2.8) from Saccharomyces cerevisiae
Also see hits to annotated proteins above

27% id,
37% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory