Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 1 curated entries in PaperBLAST's database that match '3.1.1.110' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_00863: xylonolactonase xylC
is similar to:
PaperBLAST

xylC / A0A0H3C6P8: xylono-1,5-lactonase (EC 3.1.1.110) from Caulobacter vibrioides

100% id,
100% cov

CCNA_01882: SMP-30/gluconolaconase/LRE-like protein
is similar to:
PaperBLAST

xylC / A0A0H3C6P8: xylono-1,5-lactonase (EC 3.1.1.110) from Caulobacter vibrioides

34% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory