Searching in Caulobacter crescentus NA1000 (Caulo)
Found 19 curated entries in PaperBLAST's database that match '3.1.2.4'.
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 13 relevant proteins in Caulobacter crescentus NA1000, or try another query
| CCNA_00006: enoyl-CoA hydratase is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 52% id, 99% cov |
C3KM96: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Sinorhizobium fredii | 29% id, 71% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 27% id, 71% cov |
| CCNA_01414: 3-hydroxyisobutyryl-CoA hydrolase is similar to: | PaperBLAST |
HIBCH_HUMAN / Q6NVY1: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Homo sapiens | 43% id, 89% cov |
C3KM96: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Sinorhizobium fredii | 40% id, 97% cov |
HIBCH_RAT / Q5XIE6: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Rattus norvegicus | 42% id, 90% cov |
| CCNA_02658: 3-hydroxybutyryl-CoA dehydratase is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 35% id, 99% cov |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 28% id, 69% cov |
| CCNA_01891: enoyl-CoA hydratase/carnithine racemase is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 31% id, 100% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 27% id, 54% cov |
HIBCH_RAT / Q5XIE6: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Rattus norvegicus | 26% id, 57% cov |
| CCNA_03293: multifunctional fatty acid oxidation complex subunit alpha FadJ is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 32% id, 96% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 28% id, 72% cov |
| CCNA_00401: enoyl-CoA hydratase is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 27% id, 98% cov |
HIBC1_ARATH / Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase 1; CoA-thioester hydrolase CHY1; EC 3.1.2.-; EC 3.1.2.4 from Arabidopsis thaliana | 27% id, 59% cov |
| CCNA_03180: enoyl-CoA hydratase/isomerase is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 29% id, 89% cov |
| CCNA_01890: enoyl-CoA hydratase/isomerase family protein is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 30% id, 74% cov |
| CCNA_00074: multifunctional fatty acid oxidation complex subunit alpha FadJ is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 30% id, 73% cov |
C3KM96: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Sinorhizobium fredii | 28% id, 47% cov |
bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus | 28% id, 45% cov |
| CCNA_01794: enoyl-CoA hydratase/isomerase family is similar to: | PaperBLAST |
PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens | 28% id, 73% cov |
Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 30% id, 66% cov |
PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 29% id, 66% cov |
| CCNA_00996: enoyl-CoA hydratase is similar to: | PaperBLAST |
HIBC1_ARATH / Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase 1; CoA-thioester hydrolase CHY1; EC 3.1.2.-; EC 3.1.2.4 from Arabidopsis thaliana | 26% id, 66% cov |
bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus | 26% id, 54% cov |
HIBCH_YEAST / P28817: Small ribosomal subunit protein mS47; 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Saccharomyces cerevisiae | 29% id, 43% cov |
| CCNA_02484: trans-feruloyl-CoA hydratase is similar to: | PaperBLAST |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 29% id, 57% cov |
AO353_25665: 3-hydroxy-isobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 25% id, 64% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 22% id, 73% cov |
| CCNA_01927: enoyl-CoA hydratase is similar to: | PaperBLAST |
C3KM96: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Sinorhizobium fredii | 28% id, 52% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 13 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2631762-2632829 (frame -2) on NC_011916 is similar to: | PaperBLAST |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 29% id, 61% cov |
HIBCH_RAT / Q5XIE6: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Rattus norvegicus | 27% id, 60% cov |
Lawrence Berkeley National Laboratory