Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 14 curated entries in PaperBLAST's database that match '3.2.1.48' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_02368: alpha-glucosidase
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

51% id,
94% cov

CCNA_01193: amylosucrase
is similar to:
PaperBLAST

Q6UVM5: sucrose alpha-glucosidase (EC 3.2.1.48) from Xanthomonas axonopodis

42% id,
99% cov

CCNA_02369: alpha-amylase
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

33% id,
21% cov

Q6UVM5: sucrose alpha-glucosidase (EC 3.2.1.48) from Xanthomonas axonopodis

32% id,
18% cov

CCNA_00831: alpha-glucosidase
is similar to:
PaperBLAST

AAA65097.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

27% id,
18% cov

SUIS_HUMAN / P14410: Sucrase-isomaltase, intestinal; EC 3.2.1.48; EC 3.2.1.10 from Homo sapiens
P14410: oligo-1,6-glucosidase (EC 3.2.1.10); sucrose alpha-glucosidase (EC 3.2.1.48) from Homo sapiens

27% id,
17% cov

AAT18166.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

27% id,
17% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory