Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 36 curated entries in PaperBLAST's database that match '3.5.1.25' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_00452: N-acetylglucosamine-6-phosphate deacetylase
is similar to:
PaperBLAST

CCNA_00452: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Caulobacter crescentus

100% id,
100% cov

Ga0059261_1645: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Sphingomonas koreensis

53% id,
97% cov

Shew_1117: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella loihica

51% id,
99% cov

More...

CCNA_00568: N-acetylglucosamine-6-phosphate deacetylase
is similar to:
PaperBLAST

CCNA_00452: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Caulobacter crescentus

75% id,
100% cov

Ga0059261_1645: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Sphingomonas koreensis

51% id,
98% cov

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

47% id,
99% cov

More...

CCNA_02754: L-lysine/L-arginine carboxypeptidase
is similar to:
PaperBLAST

Q8DN83: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Streptococcus pneumoniae

24% id,
92% cov

nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis

24% id,
92% cov

NAGA_BACSU / O34450: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Bacillus subtilis
CAB15506.1: N-acetylglucosamine 6-phosphate deacetylase (NagA;BSU35010) (EC 3.5.1.25)

20% id,
53% cov

CCNA_02051: imidazolonepropionase related amidohydrolase
is similar to:
PaperBLAST

CCNA_00452: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Caulobacter crescentus

22% id,
92% cov

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

30% id,
26% cov

CCNA_02050: imidazolonepropionase related amidohydrolase
is similar to:
PaperBLAST

BAA22834.1: N-acetylglucosamine 6-phosphate deacetylase (NagA) (EC 3.5.1.25)

29% id,
32% cov

NAGA_VIBCH / O32445: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Vibrio cholerae
nagA / O32445: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Vibrio cholerae

29% id,
32% cov

CCNA_00695: metal-dependent hydrolase
is similar to:
PaperBLAST

NAGA_ECO57 / P0AF19: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Escherichia coli
NAGA_ECOLI / P0AF18: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Escherichia coli
NagA / b0677: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli
AAG54999.1: EDL933_0745 (EC 3.5.1.25)
AAC73771.1: N-acetylglucosamine 6-phosphate deacetylase (NagA;b0677) (EC 3.5.1.25)
BAB34130.1: ECs0707 (EC 3.5.1.25)
nagA / P0AF18: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli

42% id,
18% cov

AAN79225.1: c0752 (NagA) (EC 3.5.1.25)

40% id,
18% cov

CCNA_02699: guanine deaminase
is similar to:
PaperBLAST

agaA / Q8XAC3: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli

33% id,
20% cov

nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis

33% id,
18% cov

Q8DN83: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Streptococcus pneumoniae

48% id,
11% cov

More...

CCNA_00115: TolB protein
is similar to:
PaperBLAST

nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis

53% id,
9% cov

Q8DN83: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Streptococcus pneumoniae

55% id,
8% cov

CCNA_00392: dihydroorotase
is similar to:
PaperBLAST

NAGA_LYSSH / Q84F86: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Lysinibacillus sphaericus

43% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory