Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01011: imidazolonepropionase
is similar to:
PaperBLAST

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

72% id,
99% cov

HUTI_AGRFC / Q8U8Z6: Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum
Q8U8Z6: imidazolonepropionase (EC 3.5.2.7) from Agrobacterium tumefaciens

64% id,
95% cov

RR42_RS16905: Imidazolonepropionase (EC 3.5.2.7) from Cupriavidus basilensis

61% id,
94% cov

More...

CCNA_03225: Metallo-dependent hydrolase
is similar to:
PaperBLAST

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

24% id,
85% cov

SM_b21166: Imidazolonepropionase (EC 3.5.2.7) from Sinorhizobium meliloti

25% id,
75% cov

HUTI_AGRFC / Q8U8Z6: Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum
Q8U8Z6: imidazolonepropionase (EC 3.5.2.7) from Agrobacterium tumefaciens

30% id,
26% cov

CCNA_02050: imidazolonepropionase related amidohydrolase
is similar to:
PaperBLAST

RR42_RS16905: Imidazolonepropionase (EC 3.5.2.7) from Cupriavidus basilensis

22% id,
63% cov

SM_b21166: Imidazolonepropionase (EC 3.5.2.7) from Sinorhizobium meliloti

22% id,
61% cov

hutI / O31200: imidazolonepropionase (EC 3.5.2.7) from Pseudomonas putida

23% id,
49% cov

More...

CCNA_02051: imidazolonepropionase related amidohydrolase
is similar to:
PaperBLAST

PfGW456L13_317: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

34% id,
34% cov

hutI / O31200: imidazolonepropionase (EC 3.5.2.7) from Pseudomonas putida

35% id,
33% cov

AO356_09595: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

33% id,
32% cov

More...

CCNA_00115: TolB protein
is similar to:
PaperBLAST

SM_b21166: Imidazolonepropionase (EC 3.5.2.7) from Sinorhizobium meliloti

29% id,
35% cov

AO356_09595: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

49% id,
11% cov

PfGW456L13_317: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

49% id,
11% cov

More...

CCNA_00695: metal-dependent hydrolase
is similar to:
PaperBLAST

SM_b21166: Imidazolonepropionase (EC 3.5.2.7) from Sinorhizobium meliloti

24% id,
31% cov

CCNA_03573: D-aminoacylase
is similar to:
PaperBLAST

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

52% id,
11% cov

CCNA_02699: guanine deaminase
is similar to:
PaperBLAST

PGA1_c36350: Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens

31% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory