Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 9 curated entries in PaperBLAST's database that match '3.5.3.23' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01680: succinylarginine dihydrolase
is similar to:
PaperBLAST

SO2706: Succinylarginine dihydrolase (EC 3.5.3.23) from Shewanella oneidensis

52% id,
99% cov

Shewana3_1728: Succinylarginine dihydrolase (EC 3.5.3.23) from Shewanella sp.

52% id,
99% cov

BWI76_RS11685: Succinylarginine dihydrolase (EC 3.5.3.23) from Klebsiella michiganensis

50% id,
100% cov

More...

CCNA_00619: succinylarginine dihydrolase
is similar to:
PaperBLAST

ASTB_ECOLI / P76216: N-succinylarginine dihydrolase; EC 3.5.3.23 from Escherichia coli
YdjT / b1745: N-succinylarginine dihydrolase (EC 3.5.3.23) from Escherichia coli
astB / RF|NP_416259.1: N-succinylarginine dihydrolase; EC 3.5.3.23 from Escherichia coli
astB / P76216: N-succinylarginine dihydrolase (EC 3.5.3.23) from Escherichia coli

48% id,
97% cov

BWI76_RS11685: Succinylarginine dihydrolase (EC 3.5.3.23) from Klebsiella michiganensis

49% id,
93% cov

ASTB_SALTY / Q8ZPU9: N-succinylarginine dihydrolase; EC 3.5.3.23 from Salmonella typhimurium

47% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory