Searching in Caulobacter crescentus NA1000 (Caulo)
Found 22 curated entries in PaperBLAST's database that match '4.1.1.18' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Caulobacter crescentus NA1000, or try another query
| CCNA_01372: lysine decarboxylase family is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 36% id, 94% cov |
| CCNA_02296: diaminopimelate decarboxylase is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 34% id, 100% cov |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 27% id, 95% cov |
| CCNA_00365: ornithine decarboxylase is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 33% id, 85% cov |
ODC_NICGU / Q9FPK5: Ornithine decarboxylase, chloroplastic; Lysine decarboxylase; EC 4.1.1.17; EC 4.1.1.18 from Nicotiana glutinosa | 31% id, 81% cov |
| CCNA_00853: 3-isopropylmalate dehydrogenase is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 27% id, 76% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 381402-382775 (frame -2) on NC_011916 is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 31% id, 95% cov |
Lawrence Berkeley National Laboratory