Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 8 curated entries in PaperBLAST's database that match '4.1.1.77' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01577: 2-keto-4-pentenoate hydratase family protein
is similar to:
PaperBLAST

AMNE_PSESP / Q9KWS3: 4-oxalocrotonate decarboxylase; EC 4.1.1.77 from Pseudomonas sp.
amnE / Q9KWS3: 4-oxalocrotonate decarboxylase monomer (EC 4.1.1.77) from Pseudomonas sp.

32% id,
50% cov

CCNA_03682: fumarylpyruvate hydrolase
is similar to:
PaperBLAST

praD / C4TP06: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Paenibacillus sp.

30% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory