Searching in Caulobacter crescentus NA1000 (Caulo)
Found 90 curated entries in PaperBLAST's database that match '4.1.2.4'.
These curated entries have 57 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Caulobacter crescentus NA1000, or try another query
| CCNA_01419: serine hydroxymethyltransferase is similar to: | PaperBLAST |
GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus | 60% id, 95% cov |
P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli | 58% id, 98% cov |
GLYA_METJA / Q58992: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-allo-threonine aldolase; EC 2.1.2.-; EC 4.1.2.49 from Methanocaldococcus jannaschii | 39% id, 89% cov |
| CCNA_03190: low-specificity L-threonine aldolase is similar to: | PaperBLAST |
O50584: low-specificity L-threonine aldolase (EC 4.1.2.48) from Pseudomonas sp. | 44% id, 99% cov |
A0T1V9: low-specificity L-threonine aldolase (EC 4.1.2.48) from Sinorhizobium arboris | 37% id, 99% cov |
| CCNA_03204: alanine racemase is similar to: | PaperBLAST |
DTA_ARTSP / O82872: D-threonine aldolase; EC 4.1.2.42 from Arthrobacter sp. | 40% id, 86% cov |
A0A0J9X243: D-threonine aldolase (EC 4.1.2.42) from Achromobacter xylosoxidans | 39% id, 86% cov |
A0A1C9ZZ39: D-threonine aldolase (EC 4.1.2.42) from Chlamydomonas reinhardtii | 35% id, 88% cov |
| CCNA_03360: tagatose-1,6-bisphosphate aldolase is similar to: | PaperBLAST |
KBAY_ECOLX / Q9KIP8: D-tagatose-1,6-bisphosphate aldolase subunit KbaY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 34% id, 99% cov |
KBAY_ECOLI / P0AB74: D-tagatose-1,6-bisphosphate aldolase subunit KbaY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 34% id, 99% cov |
GATY_ECOLI / P0C8J6: D-tagatose-1,6-bisphosphate aldolase subunit GatY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 33% id, 100% cov |
| CCNA_02479: aryl-alcohol dehydrogenase is similar to: | PaperBLAST |
AHNL_LINUS / P93243: Aliphatic (R)-hydroxynitrile lyase; LuHNL; EC 4.1.2.46 from Linum usitatissimum | 31% id, 73% cov |
| CCNA_01253: dihydrodipicolinate synthase is similar to: | PaperBLAST |
NSAE_SPHXE / Q9X9Q6: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Sphingobium xenophagum | 30% id, 57% cov |
nahE / P0A144: trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (EC 4.1.2.45) from Pseudomonas putida | 31% id, 49% cov |
NAHE1_PSEPU / Q51947: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Pseudomonas putida | 32% id, 43% cov |
| CCNA_01417: 5-aminolevulinic acid synthase is similar to: | PaperBLAST |
GLY1_YEAST / P37303: Low specificity L-threonine aldolase; Low specificity L-TA; TA; EC 4.1.2.48 from Saccharomyces cerevisiae | 25% id, 57% cov |
| CCNA_00074: multifunctional fatty acid oxidation complex subunit alpha FadJ is similar to: | PaperBLAST |
BOXC_AROEV / Q84HH6: Benzoyl-CoA-dihydrodiol lyase; EC 4.1.2.44 from Aromatoleum evansii | 28% id, 38% cov |
| CCNA_02346: arabinose-5-phosphate isomerase is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 24% id, 35% cov |
| CCNA_00117: glucosamine-fructose-6-phosphate aminotransferase, isomerizing is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 33% id, 23% cov |
| CCNA_01355: transcriptional regulator IolR is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 25% id, 29% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 76483-78705 (frame -1) on NC_011916 is similar to: | PaperBLAST |
BOXC_AROEV / Q84HH6: Benzoyl-CoA-dihydrodiol lyase; EC 4.1.2.44 from Aromatoleum evansii | 28% id, 42% cov |
Lawrence Berkeley National Laboratory