Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 7 curated entries in PaperBLAST's database that match '4.1.2.5' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_03190: low-specificity L-threonine aldolase
is similar to:
PaperBLAST

Q88R13: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas putida

43% id,
99% cov

PfGW456L13_1114: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas fluorescens

42% id,
99% cov

AO353_07670: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas fluorescens

42% id,
99% cov

CCNA_01220: 7-keto-8-aminopelargonate synthetase
is similar to:
PaperBLAST

Q9X266: L-threonine aldolase (EC 4.1.2.5) from Thermotoga maritima

26% id,
88% cov

CCNA_01417: 5-aminolevulinic acid synthase
is similar to:
PaperBLAST

GLY1 / GB|AAA72430.1: threonine aldolase; EC 4.1.2.5 from Saccharomyces cerevisiae

25% id,
57% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory