Searching in Caulobacter crescentus NA1000 (Caulo)
Found 68 curated entries in PaperBLAST's database that match '4.2.1.10' as complete word(s).
These curated entries have 50 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Caulobacter crescentus NA1000, or try another query
| CCNA_01959: 3-dehydroquinate dehydratase is similar to: | PaperBLAST |
qsuC / A4QB64: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum | 52% id, 99% cov |
O52377: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum | 52% id, 99% cov |
AROQ_STRCO / P15474: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Streptomyces coelicolor | 56% id, 92% cov |
| CCNA_00003: shikimate 5-dehydrogenase is similar to: | PaperBLAST |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 34% id, 45% cov |
| CCNA_03104: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 39% id, 21% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 31% id, 11% cov |
| CCNA_03642: succinate dehydrogenase flavoprotein subunit is similar to: | PaperBLAST |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 28% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2103759-2104283 (frame +3) on NC_011916 is similar to: | PaperBLAST |
AROQ_STRCO / P15474: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Streptomyces coelicolor | 55% id, 96% cov |
GOX0437 / Q5FTS6: periplasmic dehydroquinate dehydratase (EC 4.2.1.10) from Gluconobacter oxydans | 53% id, 96% cov |
W6JLW3: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Gluconobacter oxydans | 52% id, 96% cov |
Lawrence Berkeley National Laboratory