Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.150' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_00006: enoyl-CoA hydratase
is similar to:
PaperBLAST

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

56% id,
89% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

46% id,
99% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

44% id,
98% cov

More...

CCNA_02658: 3-hydroxybutyryl-CoA dehydratase
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

39% id,
98% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

39% id,
97% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

38% id,
97% cov

More...

CCNA_01794: enoyl-CoA hydratase/isomerase family
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

37% id,
97% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

39% id,
87% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

36% id,
87% cov

More...

CCNA_03293: multifunctional fatty acid oxidation complex subunit alpha FadJ
is similar to:
PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

35% id,
98% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

42% id,
75% cov

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

35% id,
82% cov

More...

CCNA_00996: enoyl-CoA hydratase
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

35% id,
99% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

34% id,
96% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

32% id,
100% cov

More...

CCNA_03180: enoyl-CoA hydratase/isomerase
is similar to:
PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

34% id,
93% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

33% id,
95% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

31% id,
97% cov

More...

CCNA_01891: enoyl-CoA hydratase/carnithine racemase
is similar to:
PaperBLAST

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

33% id,
94% cov

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

37% id,
84% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

32% id,
97% cov

More...

CCNA_01414: 3-hydroxyisobutyryl-CoA hydrolase
is similar to:
PaperBLAST

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

30% id,
97% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

29% id,
97% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

35% id,
74% cov

More...

CCNA_00074: multifunctional fatty acid oxidation complex subunit alpha FadJ
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

39% id,
75% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

34% id,
74% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

32% id,
73% cov

More...

CCNA_01927: enoyl-CoA hydratase
is similar to:
PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

29% id,
99% cov

Q9Y232: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Homo sapiens

31% id,
43% cov

Q9WTK2: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Mus musculus

30% id,
44% cov

More...

CCNA_02484: trans-feruloyl-CoA hydratase
is similar to:
PaperBLAST

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

30% id,
93% cov

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

30% id,
40% cov

CCNA_00401: enoyl-CoA hydratase
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

26% id,
98% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

25% id,
98% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum

25% id,
96% cov

More...

CCNA_00358: delta 3,5-delta2,4-dienoyl-CoA isomerase precursor
is similar to:
PaperBLAST

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

28% id,
85% cov

Q9Y232: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Homo sapiens

27% id,
36% cov

Q9WTK2: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Mus musculus

26% id,
37% cov

CCNA_00752: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

36% id,
42% cov

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

36% id,
15% cov

CCNA_02251: methylglutaconyl-CoA hydratase
is similar to:
PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

28% id,
37% cov

CCNA_01890: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

24% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory