Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 12 curated entries in PaperBLAST's database that match '4.2.1.43' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01486: fumarylacetoacetate (FAA) hydrolase family protein
is similar to:
PaperBLAST

SM_b20892: 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Sinorhizobium meliloti

59% id,
93% cov

Pf6N2E2_611: 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Pseudomonas fluorescens

56% id,
96% cov

AO356_24595: 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Pseudomonas fluorescens

56% id,
96% cov

More...

CCNA_00866: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

xacE / D4GP28: 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43; EC 4.2.1.141) from Haloferax volcanii

29% id,
64% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory