Curated BLAST for Genomes


Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 33 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_03028: prephenate dehydratase
is similar to:

Q5NLV8: prephenate dehydratase (EC from Zymomonas mobilis

48% id,
82% cov

CA265_RS11630: prephenate and/or arogenate dehydratase (EC from Pedobacter sp.

33% id,
98% cov

BT3936: prephenate and/or arogenate dehydratase (EC from Bacteroides thetaiotaomicron

32% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory