Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 1 curated entries in PaperBLAST's database that match '4.2.1.52' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01253: dihydrodipicolinate synthase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

41% id,
98% cov

CCNA_01624: orotate phosphoribosyltransferase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

36% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory