Searching in Caulobacter crescentus NA1000 (Caulo)
Found 52 curated entries in PaperBLAST's database that match '4.2.1.6'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Caulobacter crescentus NA1000, or try another query
| CCNA_01488: dihydroxyacid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 43% id, 99% cov |
| CCNA_00862: xylonate dehydratase xylD is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 42% id, 96% cov |
| CCNA_00566: mannonate dehydratase is similar to: | PaperBLAST |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 31% id, 100% cov |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 25% id, 93% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 33% id, 57% cov |
| CCNA_01555: altronate dehydratase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 33% id, 93% cov |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 37% id, 68% cov |
| CCNA_02903: bifunctional D-altronate/D-mannonate dehydratase is similar to: | PaperBLAST |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 31% id, 97% cov |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 26% id, 86% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 31% id, 60% cov |
| CCNA_02134: phosphogluconate dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 28% id, 90% cov |
| CCNA_03139: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 29% id, 83% cov |
| CCNA_01989: (3R)-hydroxymyristoyl-ACP dehydratase FabZ is similar to: | PaperBLAST |
fabZ: beta-hydroxyacyl-acyl carrier protein dehydratase; EC 4.2.1.60 from Toxoplasma gondii | 38% id, 62% cov |
| CCNA_03211: L-Ala-D/L-Glu racemase is similar to: | PaperBLAST |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 25% id, 70% cov |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 22% id, 73% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 22% id, 48% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2135126-2135701 (frame -3) on NC_011916 is similar to: | PaperBLAST |
fabZ: beta-hydroxyacyl-acyl carrier protein dehydratase; EC 4.2.1.60 from Toxoplasma gondii | 36% id, 68% cov |
Lawrence Berkeley National Laboratory