Curated BLAST for Genomes


Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 14 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_03104: 3-dehydroquinate synthase
is similar to:

AROB_ECOLI / P07639: 3-dehydroquinate synthase; DHQS; EC from Escherichia coli
AroB / b3389: 3-dehydroquinate synthase (EC from Escherichia coli
aroB / P07639: 3-dehydroquinate synthase (EC from Escherichia coli
P07639: 3-dehydroquinate synthase (EC from Escherichia coli

48% id,
96% cov

Q3M4V2: 3-dehydroquinate synthase (EC from Trichormus variabilis

43% id,
100% cov

DHQS_SOLLC / Q8RU74: 3-dehydroquinate synthase, chloroplastic; EC from Solanum lycopersicum

46% id,
81% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory