Searching in Caulobacter crescentus NA1000 (Caulo)
Found 3 curated entries in PaperBLAST's database that match '5.5.1.2' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Caulobacter crescentus NA1000, or try another query
| CCNA_02493: 3-carboxy-cis,cis-muconate cycloisomerase is similar to: | PaperBLAST |
RR42_RS32055: 3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2) from Cupriavidus basilensis | 50% id, 81% cov |
Q2HNZ1: 3-Carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) from Agrobacterium tumefaciens | 35% id, 94% cov |
pcaB2 / Q2HNY9: 3-carboxymuconate lactonizing enzyme type 2 (EC 5.5.1.2) from Hydrogenophaga intermedia | 37% id, 84% cov |
| CCNA_02572: adenylosuccinate lyase is similar to: | PaperBLAST |
pcaB2 / Q2HNY9: 3-carboxymuconate lactonizing enzyme type 2 (EC 5.5.1.2) from Hydrogenophaga intermedia | 31% id, 85% cov |
RR42_RS32055: 3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2) from Cupriavidus basilensis | 31% id, 85% cov |
Q2HNZ1: 3-Carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) from Agrobacterium tumefaciens | 25% id, 85% cov |
| CCNA_02194: fumarate hydratase is similar to: | PaperBLAST |
RR42_RS32055: 3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2) from Cupriavidus basilensis | 27% id, 70% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory