Curated BLAST for Genomes


Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 23 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01969: aspartyl-tRNA synthetase
is similar to:

CCNA_01969: aspartyl-tRNA(Asp/Asn) synthetase (EC from Caulobacter crescentus

100% id,
100% cov

PGA1_c24530: aspartyl-tRNA(Asp/Asn) synthetase (EC from Phaeobacter inhibens

62% id,
99% cov

Dshi_2633: aspartyl-tRNA(Asp/Asn) synthetase (EC from Dinoroseobacter shibae

61% id,
100% cov


CCNA_00757: lysyl-tRNA synthetase
is similar to:

SYDND_HELPY / P56459: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC from Helicobacter pylori

30% id,
19% cov

aspS1 / Q9RUN7: aspartyl-tRNA synthetase subunit (EC from Deinococcus radiodurans

32% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory