Curated BLAST
Searching in Caulobacter crescentus NA1000 (Caulo)
Found 21 curated entries in PaperBLAST's database that match 'Glycine cleavage system H' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Caulobacter crescentus NA1000, or try another query
CCNA_03464: glycine cleavage system H protein
is similar to: | PaperBLAST |
GCSH_ECOLI / P0A6T9: Glycine cleavage system H protein from Escherichia coli
Gcv / b2904: glycine cleavage system H protein from Escherichia coli
gcvH / P0A6T9: glycine cleavage system H protein from Escherichia coli | 53% id,
92% cov |
GCSH_THET8 / Q5SKW9: Glycine cleavage system H protein from Thermus thermophilus | 53% id,
91% cov |
GCSH_STAAM / P64213: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Staphylococcus aureus | 45% id,
94% cov |
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii | 58% id,
71% cov |
GCSH_BACSU / O32174: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Bacillus subtilis | 44% id,
91% cov |
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp. | 43% id,
92% cov |
GCSH_SCHPO / Q9HDV9: Putative glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Schizosaccharomyces pombe | 55% id,
69% cov |
GCSH_ORYSJ / A3C6G9: Glycine cleavage system H protein, mitochondrial from Oryza sativa | 50% id,
70% cov |
GCSH_FLATR / P46485: Glycine cleavage system H protein, mitochondrial; Lipoyl-bearing H protein from Flaveria trinervia | 49% id,
71% cov |
GCSH3_ARATH / Q9LQL0: Glycine cleavage system H protein 3, mitochondrial from Arabidopsis thaliana | 48% id,
70% cov |
GCSH1_ARATH / P25855: Glycine cleavage system H protein 1, mitochondrial from Arabidopsis thaliana
GDH1 / P25855: glycine cleavage system H protein 1 (EC 1.4.1.27) from Arabidopsis thaliana | 46% id,
71% cov |
GCSH_BOVIN / P20821: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Bos taurus | 47% id,
69% cov |
GCSH_CHICK / P11183: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Gallus gallus | 44% id,
73% cov |
GCSH_YEAST / P39726: Glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Saccharomyces cerevisiae | 44% id,
72% cov |
GCSH_HUMAN / P23434: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Homo sapiens
GCSH / P23434: glycine cleavage system H protein, mitochondrial (EC 1.4.1.27) from Homo sapiens | 46% id,
69% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
3627744-3628295 (frame -2) on NC_011916
is similar to: | PaperBLAST |
GCSH_THET8 / Q5SKW9: Glycine cleavage system H protein from Thermus thermophilus
Also see hits to annotated proteins above | 53% id,
95% cov |
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii
Also see hits to annotated proteins above | 49% id,
94% cov |
GCSH_FLATR / P46485: Glycine cleavage system H protein, mitochondrial; Lipoyl-bearing H protein from Flaveria trinervia
Also see hits to annotated proteins above | 45% id,
93% cov |
GCSH_ORYSJ / A3C6G9: Glycine cleavage system H protein, mitochondrial from Oryza sativa
Also see hits to annotated proteins above | 45% id,
93% cov |
GCSH3_ARATH / Q9LQL0: Glycine cleavage system H protein 3, mitochondrial from Arabidopsis thaliana
Also see hits to annotated proteins above | 42% id,
94% cov |
GCSH1_ARATH / P25855: Glycine cleavage system H protein 1, mitochondrial from Arabidopsis thaliana
GDH1 / P25855: glycine cleavage system H protein 1 (EC 1.4.1.27) from Arabidopsis thaliana
Also see hits to annotated proteins above | 41% id,
94% cov |
GCSH_BOVIN / P20821: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Bos taurus
Also see hits to annotated proteins above | 43% id,
90% cov |
GCSH_HUMAN / P23434: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Homo sapiens
GCSH / P23434: glycine cleavage system H protein, mitochondrial (EC 1.4.1.27) from Homo sapiens
Also see hits to annotated proteins above | 41% id,
87% cov |
GCSH_YEAST / P39726: Glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Saccharomyces cerevisiae
Also see hits to annotated proteins above | 42% id,
76% cov |
More... |
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory