Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01972: anthranilate synthase component I
is similar to:
PaperBLAST

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

56% id,
99% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

43% id,
94% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

43% id,
94% cov

More...

CCNA_03048: para-aminobenzoate synthetase component I
is similar to:
PaperBLAST

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

33% id,
93% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

34% id,
86% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

32% id,
86% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory