Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01974: anthranilate synthase component II/para-aminobenzoate synthase glutamine amidotransferase component II
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

65% id,
97% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

59% id,
100% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

41% id,
99% cov

CCNA_02925: carbamoyl-phosphate synthase small chain
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

33% id,
82% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

29% id,
70% cov

CCNA_00414: type 1 glutamine amidotransferase (GATase1) domain protein
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

30% id,
60% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

41% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory