Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_03740: cysteine synthase
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 48% id,
96% cov

CCNA_03271: methionine gamma-lyase
is similar to:		 PaperBLAST

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 47% id,
96% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 45% id,
99% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 44% id,
98% cov

More...

CCNA_02321: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis

 40% id,
99% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 38% id,
99% cov

7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579

 37% id,
99% cov

More...

CCNA_01493: cysteine synthase
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 36% id,
97% cov

CCNA_01491: cystathionine beta-lyase
is similar to:		 PaperBLAST

CGL_MOUSE / Q8VCN5: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Mus musculus

 35% id,
95% cov

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 33% id,
100% cov

8j6nA / Q9EQS4: Crystal structure of cystathionine gamma-lyase in complex with compound 1

 34% id,
97% cov

More...

CCNA_00988: isopenicillin N epimerase
is similar to:		 PaperBLAST

Q9M1R1: cystathionine gamma-lyase (EC 4.4.1.1) from Arabidopsis thaliana

 20% id,
76% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory