Curated BLAST for Genomes

 

Curated BLAST

Searching in Caulobacter crescentus NA1000 (Caulo)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caulobacter crescentus NA1000, or try another query

CCNA_01193: amylosucrase
is similar to:
PaperBLAST

AAM42629.1: sucrose hydrolase (SuxB;XCC3359) (EC 3.2.1.-)

43% id,
98% cov

AAQ93678.1: sucrose hydrolase (Suh) (EC 3.2.1.-)

42% id,
99% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

42% id,
99% cov

More...

CCNA_02368: alpha-glucosidase
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

45% id,
39% cov

CCNA_02369: alpha-amylase
is similar to:
PaperBLAST

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

32% id,
18% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

33% id,
18% cov

AAQ93678.1: sucrose hydrolase (Suh) (EC 3.2.1.-)

32% id,
18% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory