Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)
Found 13 curated entries in PaperBLAST's database that match '1.1.1.203' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query
| Echvi_0146: Nucleoside-diphosphate-sugar epimerases is similar to: | PaperBLAST |
PS417_17360: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae | 25% id, 90% cov |
URODH_AGRFC / Q7CRQ0: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Agrobacterium fabrum | 29% id, 60% cov |
Pf1N1B4_4511: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas fluorescens | 28% id, 59% cov |
| Echvi_3804: Nucleoside-diphosphate-sugar epimerases is similar to: | PaperBLAST |
URODH_PSESM / Q888H1: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas syringae | 31% id, 64% cov |
Pf1N1B4_4511: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas fluorescens | 29% id, 67% cov |
URODH_PSEPK / Q88NN6: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas putida | 29% id, 60% cov |
| Echvi_2328: Nucleoside-diphosphate-sugar epimerases is similar to: | PaperBLAST |
Pf1N1B4_4511: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas fluorescens | 28% id, 66% cov |
URODH_PSESM / Q888H1: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas syringae | 28% id, 64% cov |
PS417_17360: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae | 28% id, 58% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 146579-147571 (frame +2) on Echvi_Contig97.1 is similar to: | PaperBLAST |
PS417_17360: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae | 25% id, 92% cov |
Lawrence Berkeley National Laboratory