Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3562: Aldo/keto reductases, related to diketogulonate reductase
is similar to:
PaperBLAST

S4WCW2: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

41% id,
99% cov

XYL1_CANTE / O74237: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Candida tenuis
O74237: D-xylose reductase (EC 1.1.1.307) from Yamadazyma tenuis

41% id,
98% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

41% id,
97% cov

More...

Echvi_4178: Aldo/keto reductases, related to diketogulonate reductase
is similar to:
PaperBLAST

A9QVV8: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis

38% id,
92% cov

P87039: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis
C1K8Y9: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis

38% id,
92% cov

XYL1_CANTE / O74237: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Candida tenuis
O74237: D-xylose reductase (EC 1.1.1.307) from Yamadazyma tenuis

36% id,
93% cov

More...

Echvi_4177: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

34% id,
94% cov

Echvi_3882: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

33% id,
83% cov

Echvi_4302: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

28% id,
94% cov

Echvi_3881: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

33% id,
69% cov

Echvi_3747: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
is similar to:
PaperBLAST

Q876L8: D-xylose reductase (EC 1.1.1.307) from Trichoderma reesei

24% id,
91% cov

Echvi_4511: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
is similar to:
PaperBLAST

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

22% id,
80% cov

A0MTG4: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces shehatae

30% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4994325-4995188 (frame -1) on Echvi_Contig97.1
is similar to:
PaperBLAST

P87039: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis
C1K8Y9: D-xylose reductase (EC 1.1.1.307) from Candida tropicalis
Also see hits to annotated proteins above

38% id,
95% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory