Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.312' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3375: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea

29% id,
92% cov

Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni

29% id,
86% cov

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

28% id,
85% cov

Echvi_1123: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni

24% id,
95% cov

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

23% id,
94% cov

proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea

25% id,
80% cov

Echvi_3098: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea

24% id,
84% cov

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

25% id,
75% cov

Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni

28% id,
45% cov

Echvi_3092: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

23% id,
72% cov

Echvi_1921: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea

20% id,
84% cov

Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni

20% id,
81% cov

Echvi_2865: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

26% id,
57% cov

Echvi_2288: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea

31% id,
46% cov

Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni

30% id,
46% cov

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

26% id,
46% cov

Echvi_4015: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

25% id,
54% cov

Echvi_1021: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

30% id,
46% cov

Echvi_2922: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

23% id,
55% cov

Echvi_3634: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

27% id,
45% cov

proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea

27% id,
44% cov

Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni

27% id,
44% cov

Echvi_0153: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

29% id,
37% cov

Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni

28% id,
35% cov

proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea

27% id,
35% cov

Echvi_4504: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

23% id,
46% cov

Echvi_1130: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp.
ligC / Q9KWL3: LigC (EC 1.1.1.312) from Sphingobium sp.

24% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory