Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 42 curated entries in PaperBLAST's database that match '1.1.99.2'.

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3348: Predicted dehydrogenase
is similar to:
PaperBLAST

L2HDH_INDAL / S2DJ52: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Indibacter alkaliphilus

75% id,
100% cov

L2HDH_HUMAN / Q9H9P8: L-2-hydroxyglutarate dehydrogenase, mitochondrial; Duranin; EC 1.1.99.2 from Homo sapiens
Q9H9P8: L-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) from Homo sapiens

46% id,
89% cov

L2HDH_ACHAE / A0A0M7LBC1: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Achromobacter aegrifaciens

28% id,
98% cov

More...

Echvi_2803: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

34% id,
85% cov

Echvi_0924: Alcohol dehydrogenase, class IV
is similar to:
PaperBLAST

T0Q1Z2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia diclina

29% id,
92% cov

A0A067BRK4: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia parasitica

30% id,
83% cov

A0A024TMA3: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces invadans

28% id,
85% cov

More...

Echvi_3092: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

25% id,
77% cov

Echvi_3098: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

24% id,
80% cov

Echvi_1844: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

25% id,
61% cov

Echvi_3375: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

32% id,
46% cov

Echvi_1123: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

23% id,
58% cov

Echvi_0479: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

29% id,
46% cov

Echvi_1921: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

28% id,
47% cov

Echvi_2922: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

22% id,
43% cov

Echvi_1678: Predicted dehydrogenases and related proteins
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

29% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory