Curated BLAST for Genomes


Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 11 curated entries in PaperBLAST's database that match ''.

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3865: FAD/FMN-containing dehydrogenases
is similar to:

ydiJ / Q88EH0: (R)-2-hydroxyglutarate dehydrogenase (EC from Pseudomonas putida
PP_4493: D-2-hydroxyglutarate dehydrogenase (EC from Pseudomonas putida

35% id,
61% cov

D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC from Xanthomonas citri

25% id,
60% cov

D2HDH_PSEU5 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC; EC 1.1.99.- from Pseudomonas stutzeri

25% id,
60% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory