Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)
Found 30 curated entries in PaperBLAST's database that match '1.13.11.11' as complete word(s).
These curated entries have 21 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query
| Echvi_2991: Tryptophan 2,3-dioxygenase (vermilion) is similar to: | PaperBLAST |
T23O_PSEFL / Q84HF6: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Pseudomonas fluorescens | 27% id, 92% cov |
T23O_XANCP / Q8PDA8: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Xanthomonas campestris | 34% id, 44% cov |
T23O_RAT / P21643: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Rattus norvegicus | 37% id, 35% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3574749-3575753 (frame +3) on Echvi_Contig97.1 is similar to: | PaperBLAST |
PS417_23705: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Pseudomonas simiae | 29% id, 91% cov |
AO353_05970: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Pseudomonas fluorescens | 37% id, 42% cov |
Lawrence Berkeley National Laboratory