Curated BLAST for Genomes


Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 21 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_1105: Homogentisate 1,2-dioxygenase
is similar to:

SO1963: Homogentisate 1,2-dioxygenase (EC from Shewanella oneidensis

44% id,
100% cov

Psest_3513: Homogentisate 1,2-dioxygenase (EC from Pseudomonas stutzeri

34% id,
97% cov

HGD_HUMAN / Q93099: Homogentisate 1,2-dioxygenase; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC from Homo sapiens
HGD / Q93099: Homogentisate 1,2-dioxygenase (EC from Homo sapiens
Q93099: homogentisate 1,2-dioxygenase (EC from Homo sapiens

24% id,
88% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory