Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 1 curated entries in PaperBLAST's database that match '1.3.99.10' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_1473: Acyl-CoA dehydrogenases
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

41% id,
89% cov

Echvi_1212: Acyl-CoA dehydrogenases
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

40% id,
88% cov

Echvi_1073: Acyl-CoA dehydrogenases
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

33% id,
91% cov

Echvi_2990: Acyl-CoA dehydrogenases
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

30% id,
88% cov

Echvi_0738: Acyl-CoA dehydrogenases
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory