Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 108 curated entries in PaperBLAST's database that match '1.4.1.2'.

These curated entries have 87 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_0744: glycine dehydrogenase (decarboxylating)
is similar to:		 PaperBLAST

P33195: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Escherichia coli

 56% id,
99% cov

P26969: glycine cleavage system (subunit 3/4) (EC 1.4.1.27) from Pisum sativum

 58% id,
91% cov

Q94B78: glycine cleavage system (subunit 4/5) (EC 1.4.1.27) from Arabidopsis thaliana

 56% id,
93% cov

More...

Echvi_1535: Glutamate dehydrogenase/leucine dehydrogenase
is similar to:		 PaperBLAST

P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima

 52% id,
98% cov

Q43314: glutamate dehydrogenase (EC 1.4.1.2); glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Arabidopsis thaliana

 47% id,
99% cov

GDH2 / Q38946: glutamate dehydrogenase β subunit (EC 1.4.1.2) from Arabidopsis thaliana

 46% id,
99% cov

More...

Echvi_0770: dihydrolipoamide dehydrogenase
is similar to:		 PaperBLAST

Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana

 52% id,
91% cov

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens

 51% id,
92% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

 50% id,
92% cov

More...

Echvi_4084: glycine cleavage system H protein
is similar to:		 PaperBLAST

P0A6T9: glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli

 45% id,
98% cov

gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp.

 46% id,
92% cov

GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii

 50% id,
74% cov

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Echvi_0091: glycine cleavage system T protein
is similar to:		 PaperBLAST

Q9WY54: glycine cleavage system (EC 1.4.1.27) from Thermotoga maritima

 45% id,
98% cov

O58888: glycine cleavage system (EC 1.4.1.27) from Pyrococcus horikoshii

 42% id,
97% cov

gcvT / P54261: glycine cleavage system T-protein (EC 1.4.1.27) from Synechocystis sp.
P54261: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Synechocystis sp.

 42% id,
92% cov

More...

Echvi_1756: Glutamate dehydrogenase/leucine dehydrogenase
is similar to:		 PaperBLAST

DHPH_CALTT / F5L9G2: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Caldalkalibacillus thermarum

 45% id,
95% cov

VDH_STRCO / Q06539: Valine dehydrogenase; ValDH; EC 1.4.1.23 from Streptomyces coelicolor
vdh / Q06539: valine dehydrogenase monomer (EC 1.4.1.23) from Streptomyces coelicolor

 47% id,
92% cov

DHPH_BACBA / Q59224: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Bacillus badius
Q59224: phenylalanine dehydrogenase (EC 1.4.1.20) from Bacillus badius

 44% id,
97% cov

More...

Echvi_4609: dihydrolipoamide dehydrogenase
is similar to:		 PaperBLAST

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

 44% id,
93% cov

Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana

 44% id,
92% cov

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens

 41% id,
90% cov

More...

Echvi_4481: mercuric reductase
is similar to:		 PaperBLAST

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

 33% id,
92% cov

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

 30% id,
97% cov

Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana

 32% id,
91% cov

More...

Echvi_4146: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
is similar to:		 PaperBLAST

P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp.

 30% id,
97% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

 31% id,
90% cov

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

 29% id,
95% cov

More...

Echvi_0722: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
is similar to:		 PaperBLAST

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

 30% id,
94% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

 29% id,
90% cov

Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana

 30% id,
89% cov

More...

Echvi_0862: Glutamate dehydrogenase/leucine dehydrogenase
is similar to:		 PaperBLAST

Q9TVN3: glutamate dehydrogenase (EC 1.4.1.2) from Entodinium caudatum

 23% id,
84% cov

DHE2_PYRCJ / A3MUY9: NAD(+)-dependent glutamate dehydrogenase; NAD-GDH; NAD-specific glutamate dehydrogenase; EC 1.4.1.2 from Pyrobaculum calidifontis
A3MUY9: glutamate dehydrogenase (EC 1.4.1.2) from Pyrobaculum calidifontis

 27% id,
67% cov

Q852M0: glutamate dehydrogenase (EC 1.4.1.2) from Oryza sativa

 26% id,
67% cov

More...

Echvi_2920: geranylgeranyl reductase family
is similar to:		 PaperBLAST

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens

 59% id,
7% cov

O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus

 59% id,
7% cov

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

 49% id,
8% cov

Echvi_3807: Thioredoxin reductase
is similar to:		 PaperBLAST

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

 45% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory