Curated BLAST
Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)
Found 51 curated entries in PaperBLAST's database that match '1.5.5.2'.
These curated entries have 41 distinct sequences.
Running ublast with E ≤ 0.01
Found 12 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query
Echvi_0119: Proline dehydrogenase is similar to: | PaperBLAST |
Echvi_0119: Proline dehydrogenase (EC 1.5.5.2) from Echinicola vietnamensis | 100% id, 100% cov |
CA265_RS11605: Proline dehydrogenase (EC 1.5.5.2) from Pedobacter sp. | 49% id, 98% cov |
HYPDH_HUMAN / Q9UF12: Hydroxyproline dehydrogenase; HYPDH; Kidney and liver proline oxidase 1; HsPOX1; Probable proline dehydrogenase 2; Probable proline oxidase 2; EC 1.5.5.3; EC 1.5.5.2 from Homo sapiens | 28% id, 93% cov |
Q4CVA1: proline dehydrogenase (EC 1.5.5.2) from Trypanosoma cruzi | 28% id, 74% cov |
PROD_CAEEL / O45228: Proline dehydrogenase 1, mitochondrial; Proline oxidase; EC 1.5.5.2 from Caenorhabditis elegans | 35% id, 58% cov |
PROD2_ARATH / Q6NKX1: Proline dehydrogenase 2, mitochondrial; Osmotic stress-induced proline dehydrogenase; Proline oxidase; EC 1.5.5.2 from Arabidopsis thaliana POX2 / Q6NKX1: proline dehydrogenase 2 (EC 1.5.5.2) from Arabidopsis thaliana | 38% id, 52% cov |
HYPDH_MOUSE / Q8VCZ9: Hydroxyproline dehydrogenase; HYPDH; Kidney and liver proline oxidase 1; MmPOX1; Probable proline dehydrogenase 2; Probable proline oxidase 2; Proline oxidase-like protein; PO; Proline oxidase; EC 1.5.5.3; EC 1.5.5.2 from Mus musculus | 31% id, 61% cov |
PROD1_ARATH / P92983: Proline dehydrogenase 1, mitochondrial; Osmotic stress-induced proline dehydrogenase; Proline oxidase; Protein EARLY RESPONSIVE TO DEHYDRATION 5; EC 1.5.5.2 from Arabidopsis thaliana POX1 / P92983: proline dehydrogenase 1 (EC 1.5.5.2) from Arabidopsis thaliana P92983: proline dehydrogenase (EC 1.5.5.2) from Arabidopsis thaliana | 37% id, 49% cov |
V9XZ65: proline dehydrogenase (EC 1.5.5.2) from Jatropha curcas | 36% id, 51% cov |
Q9WU79: proline dehydrogenase (EC 1.5.5.2) from Mus musculus | 40% id, 44% cov |
PROD_HUMAN / O43272: Proline dehydrogenase 1, mitochondrial; Proline oxidase; Proline oxidase 2; p53-induced gene 6 protein; EC 1.5.5.2 from Homo sapiens PRODH / O43272: mitochondrial proline dehydrogenase 1 (EC 1.5.5.2) from Homo sapiens O43272: proline dehydrogenase (EC 1.5.5.2) from Homo sapiens | 40% id, 44% cov |
PUT1_YEAST / P09368: Proline dehydrogenase, mitochondrial; Proline oxidase; EC 1.5.5.2 from Saccharomyces cerevisiae put1 / P09368: proline dehydrogenase (EC 1.5.5.2) from Saccharomyces cerevisiae | 30% id, 53% cov |
PROD_DROME / Q04499: Proline dehydrogenase 1, mitochondrial; Proline oxidase; Protein sluggish-A; EC 1.5.5.2 from Drosophila melanogaster | 41% id, 38% cov |
V9XZ65: proline dehydrogenase (EC 1.5.5.2) from Jatropha curcas | 26% id, 21% cov |
Q4CVA1: proline dehydrogenase (EC 1.5.5.2) from Trypanosoma cruzi | 39% id, 7% cov |
More... |
Echvi_1300: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 is similar to: | PaperBLAST |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 29% id, 49% cov |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 27% id, 46% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 27% id, 46% cov |
PGA1_c11750: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Phaeobacter inhibens | 29% id, 42% cov |
BWI76_RS10795: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Klebsiella michiganensis | 29% id, 41% cov |
AO353_12810: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas fluorescens | 29% id, 40% cov |
AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense | 29% id, 40% cov |
Ac3H11_2850: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Acidovorax sp. | 29% id, 39% cov |
RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis | 30% id, 36% cov |
HSERO_RS00905: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Herbaspirillum seropedicae | 30% id, 37% cov |
PUTA_ECOLI / P09546: Bifunctional protein PutA; EC 1.5.5.2; EC 1.2.1.88 from Escherichia coli PutA / B1014: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli PutA / P09546: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli P09546: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); proline dehydrogenase (EC 1.5.5.2) from Escherichia coli | 29% id, 38% cov |
putA / P10503: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate γ-semialdehyde dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Salmonella typhimurium | 29% id, 38% cov |
HP15_2688: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Marinobacter adhaerens | 29% id, 36% cov |
putA / Q88D80: proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Pseudomonas putida | 31% id, 34% cov |
More... |
Echvi_0535: NAD-dependent aldehyde dehydrogenases is similar to: | PaperBLAST |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 27% id, 46% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 27% id, 46% cov |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 28% id, 43% cov |
HSERO_RS00905: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Herbaspirillum seropedicae | 29% id, 37% cov |
Ac3H11_2850: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Acidovorax sp. | 29% id, 36% cov |
AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense | 27% id, 39% cov |
HP15_2688: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Marinobacter adhaerens | 26% id, 40% cov |
PGA1_c11750: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Phaeobacter inhibens | 27% id, 38% cov |
putA / P10503: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate γ-semialdehyde dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Salmonella typhimurium | 29% id, 35% cov |
RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis | 31% id, 33% cov |
PUTA_ECOLI / P09546: Bifunctional protein PutA; EC 1.5.5.2; EC 1.2.1.88 from Escherichia coli PutA / B1014: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli PutA / P09546: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli P09546: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); proline dehydrogenase (EC 1.5.5.2) from Escherichia coli | 29% id, 35% cov |
AO353_12810: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas fluorescens | 29% id, 34% cov |
BWI76_RS10795: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Klebsiella michiganensis | 29% id, 35% cov |
putA / Q88D80: proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Pseudomonas putida | 29% id, 34% cov |
More... |
Echvi_0481: NAD-dependent aldehyde dehydrogenases is similar to: | PaperBLAST |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 28% id, 42% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 28% id, 42% cov |
PGA1_c11750: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Phaeobacter inhibens | 31% id, 35% cov |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 28% id, 39% cov |
HP15_2688: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Marinobacter adhaerens | 28% id, 36% cov |
putA / P10503: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate γ-semialdehyde dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Salmonella typhimurium | 29% id, 34% cov |
AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense | 28% id, 35% cov |
PUTA_ECOLI / P09546: Bifunctional protein PutA; EC 1.5.5.2; EC 1.2.1.88 from Escherichia coli PutA / B1014: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli PutA / P09546: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli P09546: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); proline dehydrogenase (EC 1.5.5.2) from Escherichia coli | 29% id, 34% cov |
putA / Q88D80: proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Pseudomonas putida | 29% id, 33% cov |
Ac3H11_2850: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Acidovorax sp. | 28% id, 34% cov |
AO353_12810: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas fluorescens | 29% id, 33% cov |
BWI76_RS10795: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Klebsiella michiganensis | 28% id, 34% cov |
RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis | 29% id, 33% cov |
HSERO_RS00905: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Herbaspirillum seropedicae | 26% id, 35% cov |
More... |
Echvi_1497: NAD-dependent aldehyde dehydrogenases is similar to: | PaperBLAST |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 23% id, 40% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 23% id, 39% cov |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 25% id, 34% cov |
HSERO_RS00905: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Herbaspirillum seropedicae | 24% id, 34% cov |
putA / Q88D80: proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Pseudomonas putida | 27% id, 29% cov |
AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense | 26% id, 27% cov |
AO353_12810: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas fluorescens | 27% id, 26% cov |
putA / P10503: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate γ-semialdehyde dehydrogenase (EC 1.2.1.88; EC 1.5.5.2) from Salmonella typhimurium | 26% id, 26% cov |
PUTA_ECOLI / P09546: Bifunctional protein PutA; EC 1.5.5.2; EC 1.2.1.88 from Escherichia coli PutA / B1014: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli PutA / P09546: fused DNA-binding transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA (EC 1.5.5.2; EC 1.2.1.88) from Escherichia coli P09546: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); proline dehydrogenase (EC 1.5.5.2) from Escherichia coli | 26% id, 26% cov |
RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis | 26% id, 25% cov |
BWI76_RS10795: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Klebsiella michiganensis | 26% id, 26% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
529429-530964 (frame +1) on Echvi_Contig97.1 is similar to: | PaperBLAST |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. Also see hits to annotated proteins above | 28% id, 45% cov |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis Also see hits to annotated proteins above | 28% id, 45% cov |
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory