Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 71 curated entries in PaperBLAST's database that match '2.1.2.1' as complete word(s).

These curated entries have 51 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_1188: Glycine/serine hydroxymethyltransferase
is similar to:
PaperBLAST

GLYA_THET8 / Q5SI56: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Thermus thermophilus
Q5SI56: glycine hydroxymethyltransferase (EC 2.1.2.1) from Thermus thermophilus

56% id,
99% cov

I7H6W6: glycine hydroxymethyltransferase (EC 2.1.2.1) from Aphanothece halophytica

58% id,
95% cov

glyA / P77962: glycine hydroxymethyltransferase (EC 2.1.2.1) from Synechocystis sp.

58% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory