Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 1 curated entries in PaperBLAST's database that match '2.3.1.182' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_2061: Isopropylmalate/homocitrate/citramalate synthases
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

60% id,
100% cov

Echvi_3833: Isopropylmalate/homocitrate/citramalate synthases
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

31% id,
75% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory