Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 38 curated entries in PaperBLAST's database that match '2.3.3.13' as complete word(s).

These curated entries have 31 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3833: Isopropylmalate/homocitrate/citramalate synthases is similar to:	PaperBLAST
Echvi_3833: 2-isopropylmalate synthase (EC 2.3.3.13) from Echinicola vietnamensis	100% id, 100% cov
CA265_RS15855: 2-isopropylmalate synthase (EC 2.3.3.13) from Pedobacter sp.	65% id, 98% cov
BT1861: 2-isopropylmalate synthase (EC 2.3.3.13) from Bacteroides thetaiotaomicron	70% id, 75% cov
A0A0G2T6D7: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum pennellii	50% id, 87% cov
LEU1_SULAC / Q4JA78: 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius	44% id, 97% cov
K4CJ56: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	48% id, 88% cov
LEU11_LEPIN / Q8F445: 2-isopropylmalate synthase 1; Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1; EC 2.3.3.13 from Leptospira interrogans	55% id, 76% cov
LeuA / b0074: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli leuA / P09151: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli	53% id, 72% cov
LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis	50% id, 75% cov
Q9FG67: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	48% id, 79% cov
Q9FN52: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	48% id, 78% cov
LEU1_SALTY / P15875: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Salmonella typhimurium	51% id, 73% cov
Q72JC9: 2-isopropylmalate synthase (EC 2.3.3.13) from Thermus thermophilus	49% id, 75% cov
LEU1_SOYBN / Q39891: Probable 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; Late nodulin-56; N-56; EC 2.3.3.13 from Glycine max	48% id, 70% cov
K4C627: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	53% id, 64% cov
B0SN40: 2-isopropylmalate synthase (EC 2.3.3.13) from Leptospira biflexa	35% id, 97% cov
Q30DX9: 2-isopropylmalate synthase (EC 2.3.3.13) from Brassica insularis	54% id, 62% cov
LEU12_ARATH / Q9C550: 2-isopropylmalate synthase 2, chloroplastic; 2-isopropylmalate synthase 1; Methylthioalkylmalate synthase-like 3; EC 2.3.3.13 from Arabidopsis thaliana Q9C550: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	54% id, 62% cov
LEU11_ARATH / Q9LPR4: 2-isopropylmalate synthase 1, chloroplastic; Methylthioalkylmalate synthase-like 4; EC 2.3.3.13 from Arabidopsis thaliana Q9LPR4: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	54% id, 62% cov
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	46% id, 72% cov
Q2QXY9: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	51% id, 62% cov
Q2RAP8: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	51% id, 62% cov
LEU12_LEPIN / Q8F8T4: 2-isopropylmalate synthase 2; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; EC 2.3.3.13 from Leptospira interrogans	33% id, 90% cov
LEU9_YEAST / Q12166: 2-isopropylmalate synthase 2, mitochondrial; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; Alpha-isopropylmalate synthase II; EC 2.3.3.13 from Saccharomyces cerevisiae	28% id, 67% cov
LEU1_YEAST / P06208: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Saccharomyces cerevisiae	27% id, 65% cov
HTYA_ASPRU / K0E4E5: Isopropyl malate synthase htyA; L-homotyrosine biosynthetic cluster protein A; EC 2.3.3.13 from Aspergillus rugulosus	25% id, 63% cov
AMT7_ALTAL / C9K7B8: Isopropyl malate synthase AMT7; AM-toxin biosynthesis protein 7; EC 2.3.3.13 from Alternaria alternata	24% id, 65% cov
LEU1_MYCTO / P9WQB2: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis LEU1_MYCTU / P9WQB3: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis P9WQB3: 2-isopropylmalate synthase (EC 2.3.3.13) from Mycobacterium tuberculosis	27% id, 56% cov
LEU1_CORGL / P42455: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Corynebacterium glutamicum	27% id, 50% cov
GLOH_GLAL2 / S3D9F8: Isopropyl malate synthase gloH; L-homotyrosine biosynthesis sub-cluster protein gloH; Pneumocandin biosynthesis cluster protein H; EC 2.3.3.13 from Glarea lozoyensis	25% id, 51% cov
More...

Echvi_2061: Isopropylmalate/homocitrate/citramalate synthases is similar to:	PaperBLAST
LEU1_SULAC / Q4JA78: 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius	33% id, 96% cov
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	34% id, 94% cov
Echvi_3833: 2-isopropylmalate synthase (EC 2.3.3.13) from Echinicola vietnamensis	31% id, 97% cov
LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis	30% id, 96% cov
LEU11_LEPIN / Q8F445: 2-isopropylmalate synthase 1; Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1; EC 2.3.3.13 from Leptospira interrogans	29% id, 98% cov
BT1861: 2-isopropylmalate synthase (EC 2.3.3.13) from Bacteroides thetaiotaomicron	28% id, 98% cov
Q72JC9: 2-isopropylmalate synthase (EC 2.3.3.13) from Thermus thermophilus	29% id, 95% cov
CA265_RS15855: 2-isopropylmalate synthase (EC 2.3.3.13) from Pedobacter sp.	28% id, 96% cov
K4CJ56: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	31% id, 87% cov
A0A0G2T6D7: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum pennellii	31% id, 86% cov
Q9FG67: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	32% id, 82% cov
B0SN40: 2-isopropylmalate synthase (EC 2.3.3.13) from Leptospira biflexa	27% id, 97% cov
LeuA / b0074: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli leuA / P09151: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli	28% id, 94% cov
Q9FN52: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	32% id, 79% cov
LEU1_SOYBN / Q39891: Probable 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; Late nodulin-56; N-56; EC 2.3.3.13 from Glycine max	30% id, 84% cov
LEU1_SALTY / P15875: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Salmonella typhimurium	26% id, 94% cov
K4C627: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	29% id, 85% cov
LEU12_LEPIN / Q8F8T4: 2-isopropylmalate synthase 2; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; EC 2.3.3.13 from Leptospira interrogans	28% id, 88% cov
LEU11_ARATH / Q9LPR4: 2-isopropylmalate synthase 1, chloroplastic; Methylthioalkylmalate synthase-like 4; EC 2.3.3.13 from Arabidopsis thaliana Q9LPR4: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	29% id, 80% cov
Q30DX9: 2-isopropylmalate synthase (EC 2.3.3.13) from Brassica insularis	28% id, 81% cov
Q2QXY9: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	27% id, 81% cov
Q2RAP8: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	27% id, 81% cov
LEU12_ARATH / Q9C550: 2-isopropylmalate synthase 2, chloroplastic; 2-isopropylmalate synthase 1; Methylthioalkylmalate synthase-like 3; EC 2.3.3.13 from Arabidopsis thaliana Q9C550: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	29% id, 75% cov
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The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory