Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 150 curated entries in PaperBLAST's database that match '2.4.2.1'.

These curated entries have 101 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_2214: orotate phosphoribosyltransferase
is similar to:
PaperBLAST

Q8DTV2: orotate phosphoribosyltransferase (EC 2.4.2.10) from Streptococcus mutans

56% id,
99% cov

PYRE_BACCL / P46534: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Bacillus caldolyticus

53% id,
97% cov

pyrE / P25972: orotate phosphoribosyltransferase (EC 2.4.2.10) from Bacillus subtilis

53% id,
95% cov

More...

Echvi_2460: ATP phosphoribosyltransferase
is similar to:
PaperBLAST

Q9PM78: ATP phosphoribosyltransferase (EC 2.4.2.17) from Campylobacter jejuni

49% id,
99% cov

HIS1_ECOLI / P60757: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Escherichia coli
HisG / b2019: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli
hisG / P60757: ATP phosphoribosyltransferase (EC 2.4.2.17) from Escherichia coli

48% id,
98% cov

HIS1_SALTY / P00499: ATP phosphoribosyltransferase; ATP-PRT; ATP-PRTase; EC 2.4.2.17 from Salmonella typhimurium

48% id,
98% cov

More...

Echvi_0304: purine nucleoside phosphorylase I, inosine and guanosine-specific
is similar to:
PaperBLAST

PUNA_GEOSE / P77834: Purine nucleoside phosphorylase 1; PNP 1; Inosine phosphorylase; Inosine-guanosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; Pu-NPase I; EC 2.4.2.1 from Geobacillus stearothermophilus

48% id,
98% cov

P55859: purine-nucleoside phosphorylase (EC 2.4.2.1) from Bos taurus

51% id,
88% cov

PNPH_HUMAN / P00491: Purine nucleoside phosphorylase; PNP; Inosine phosphorylase; Inosine-guanosine phosphorylase; EC 2.4.2.1 from Homo sapiens
PNP / P00491: purine nucleoside phosphorylase subunit (EC 2.4.2.1; EC 2.4.2.15) from Homo sapiens
P00491: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

50% id,
88% cov

More...

Echvi_1158: nicotinate-nucleotide pyrophosphorylase
is similar to:
PaperBLAST

NADC_ARATH / Q9ZU32: Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic; Quinolinate phosphoribosyltransferase [decarboxylating]; EC 2.4.2.19 from Arabidopsis thaliana

50% id,
83% cov

Q0WX55: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Nicotiana tabacum

50% id,
83% cov

Q0WX54: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Nicotiana tabacum

49% id,
82% cov

More...

Echvi_2507: anthranilate phosphoribosyltransferase
is similar to:
PaperBLAST

TRPD_THET8 / Q5SH88: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus
TRPD_THETH / P83827: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus

34% id,
98% cov

TRPD2_NOSS1 / Q8YXQ9: Anthranilate phosphoribosyltransferase 2; EC 2.4.2.18 from Nostoc sp.

33% id,
94% cov

TRPD_XANCP / Q8PD71: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Xanthomonas campestris

33% id,
93% cov

More...

Echvi_1798: Uridine phosphorylase
is similar to:
PaperBLAST

DEOD_SALTY / Q8ZJV7: Purine nucleoside phosphorylase DeoD-type; PNP; EC 2.4.2.1 from Salmonella typhimurium

25% id,
96% cov

DEOD_ECOLI / P0ABP8: Purine nucleoside phosphorylase DeoD-type; PNP; EC 2.4.2.1 from Escherichia coli
Pup / b4384: purine nucleoside phosphorylase (EC 2.4.2.15; EC 2.4.2.1) from Escherichia coli
deoD / RF|NP_418801: purine nucleoside phosphorylase deoD-type; EC 2.4.2.1 from Escherichia coli
deoD / P0ABP8: purine nucleoside phosphorylase (EC 2.4.2.15; EC 2.4.2.1) from Escherichia coli
P0ABP8: purine-nucleoside phosphorylase (EC 2.4.2.1) from Escherichia coli

25% id,
96% cov

deoD: purine nucleoside phosphorylase; EC 2.4.2.1 from Bacillus anthracis

26% id,
89% cov

More...

Echvi_2506: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
is similar to:
PaperBLAST

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

41% id,
35% cov

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

40% id,
35% cov

Echvi_0658: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
is similar to:
PaperBLAST

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

35% id,
35% cov

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

35% id,
35% cov

Echvi_1262: asparagine synthase (glutamine-hydrolyzing)
is similar to:
PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

29% id,
35% cov

Echvi_0152: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
is similar to:
PaperBLAST

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

27% id,
35% cov

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

27% id,
35% cov

Echvi_4653: Glutamine phosphoribosylpyrophosphate amidotransferase
is similar to:
PaperBLAST

PUR1_ECOLI / P0AG16: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Escherichia coli
Ade / b2312: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli
purF / P0AG16: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli

30% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1325369-1326259 (frame +2) on Echvi_Contig97.1
is similar to:
PaperBLAST

NADC_ARATH / Q9ZU32: Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic; Quinolinate phosphoribosyltransferase [decarboxylating]; EC 2.4.2.19 from Arabidopsis thaliana
Also see hits to annotated proteins above

49% id,
86% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory