Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.44' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_0675: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

33% id,
99% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

28% id,
95% cov

Echvi_0124: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

32% id,
97% cov

CRU31975 / Q42685: L-alanine aminotransferase monomer (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4) from Chlamydomonas reinhardtii

30% id,
33% cov

Echvi_2919: Ornithine/acetylornithine aminotransferase
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

33% id,
85% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

31% id,
86% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

31% id,
84% cov

More...

Echvi_3848: Ornithine/acetylornithine aminotransferase
is similar to:
PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

34% id,
77% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

32% id,
79% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

31% id,
79% cov

More...

Echvi_0577: ornithine aminotransferase
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

28% id,
85% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

29% id,
80% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

27% id,
84% cov

More...

Echvi_0150: glutamate-1-semialdehyde-2,1-aminomutase
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

27% id,
84% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

29% id,
73% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

24% id,
83% cov

More...

Echvi_2790: adenosylmethionine-8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

26% id,
85% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

26% id,
83% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

26% id,
82% cov

Echvi_0032: Aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

GGT1_ARATH / Q9LR30: Glutamate--glyoxylate aminotransferase 1; AtGGT2; Alanine aminotransferase GGT1; Alanine--glyoxylate aminotransferase GGT1; Alanine-2-oxoglutarate aminotransferase 1; EC 2.6.1.4; EC 2.6.1.2; EC 2.6.1.44; EC 2.6.1.- from Arabidopsis thaliana
AOAT1 / Q9LR30: alanine transaminase (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4) from Arabidopsis thaliana

24% id,
78% cov

GGT2_ARATH / Q9S7E9: Glutamate--glyoxylate aminotransferase 2; AtGGT2; Alanine aminotransferase GGT2; Alanine--glyoxylate aminotransferase GGT2; Alanine-2-oxoglutarate aminotransferase 2; EC 2.6.1.4; EC 2.6.1.2; EC 2.6.1.44; EC 2.6.1.- from Arabidopsis thaliana
AOAT2 / Q9S7E9: alanine transaminase (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4) from Arabidopsis thaliana

24% id,
75% cov

CRU31975 / Q42685: L-alanine aminotransferase monomer (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4) from Chlamydomonas reinhardtii

25% id,
71% cov

Echvi_1046: Glutamate decarboxylase and related PLP-dependent proteins
is similar to:
PaperBLAST

HKT_ANOGA / Q7PRG3: 3-hydroxykynurenine transaminase; AgHKT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Anopheles gambiae

24% id,
44% cov

HKT_AEDAE / Q0IG34: 3-hydroxykynurenine transaminase; 3-hydroxykynurenine transaminase and alanine--glyoxylate aminotransferase; Ae-HKT/AGT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Aedes aegypti

26% id,
24% cov

Echvi_4167: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes
is similar to:
PaperBLAST

AGT1_RAT / P09139: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase, mitochondrial; SPT; EC 2.6.1.44; EC 2.6.1.51 from Rattus norvegicus

21% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3494090-3495313 (frame -2) on Echvi_Contig97.1
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana
Also see hits to annotated proteins above

32% id,
88% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana
Also see hits to annotated proteins above

30% id,
89% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory