Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 31 curated entries in PaperBLAST's database that match '2.6.1.52'.

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_1811: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
is similar to:
PaperBLAST

Q2F5M8: phosphoserine transaminase (EC 2.6.1.52) from Bombyx mori

22% id,
98% cov

SERC_HUMAN / Q9Y617: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Homo sapiens
PSAT1 / Q9Y617: Phosphoserine aminotransferase (EC 2.6.1.52) from Homo sapiens
Q9Y617: glycine transaminase (EC 2.6.1.4); phosphoserine transaminase (EC 2.6.1.52) from Homo sapiens

20% id,
97% cov

SERC_ECOLI / P23721: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Escherichia coli
SerC / b0907: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
serC: phosphoserine aminotransferase; EC 2.6.1.52 from Escherichia coli
serC / P23721: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
P23721: phosphoserine transaminase (EC 2.6.1.52) from Escherichia coli

31% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory