Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_0561: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus
A0A0H2WZY4: ribokinase (EC 2.7.1.15) from Staphylococcus aureus

27% id,
96% cov

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

28% id,
79% cov

Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum

22% id,
94% cov

More...

Echvi_0156: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis

28% id,
93% cov

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli

26% id,
93% cov

Echvi_2804: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

RBSK_HUMAN / Q9H477: Ribokinase; RK; EC 2.7.1.15 from Homo sapiens
Q9H477: ribokinase (EC 2.7.1.15) from Homo sapiens

27% id,
80% cov

BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis

25% id,
82% cov

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli

24% id,
87% cov

More...

Echvi_3631: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli

23% id,
90% cov

Echvi_0157: hexose kinase, 1-phosphofructokinase family
is similar to:
PaperBLAST

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

32% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory