Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_0696: galactokinase
is similar to:
PaperBLAST

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

35% id,
95% cov

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

35% id,
92% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

35% id,
89% cov

Echvi_3894: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

31% id,
100% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

31% id,
99% cov

H6UH58: glucokinase (EC 2.7.1.2) from Staphylococcus aureus

31% id,
96% cov

More...

Echvi_3311: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

30% id,
99% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

29% id,
98% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

29% id,
97% cov

More...

Echvi_3420: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

30% id,
96% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

26% id,
97% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

26% id,
97% cov

More...

Echvi_3892: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

30% id,
93% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

28% id,
99% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

28% id,
100% cov

More...

Echvi_3910: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

25% id,
97% cov

H6UH58: glucokinase (EC 2.7.1.2) from Staphylococcus aureus

24% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory